PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_001170-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 350aa    MW: 38862.9 Da    PI: 6.6517
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_001170-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.5e-14167213354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+e+ErrRR+riN+ +++Lr+llP+      +K +Ka+ L ++++++k+L
  NNU_001170-RA 167 KSHSEAERRRRERINNHLAKLRSLLPNT-----TKTDKASLLAEVIQHVKEL 213
                    79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088817.136164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-11167213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-15168221IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-15168222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.3E-13170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.03E-5177216No hitNo description
Gene3DG3DSA:3.30.70.2601.7E-4249300No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MVAKKEEDQG DCSQTIQSIQ GKQEQLFIQH QQQQLQQHHQ QQYSDGYEGG VAGRGGGLLL  60
PELSPIIPWS LPPIHTFNPV HQFSTNPVRD HDPFLVPPPL PYGGLFGRRA SALQFAYDGP  120
SSDHLRLISD PHGPVVQPGS SPFGIQAELG KMTAQEIMDA KALAASKSHS EAERRRRERI  180
NNHLAKLRSL LPNTTKTDKA SLLAEVIQHV KELKRQTSQI AEVSPVPTEV DELTVDASDE  240
DGKLIIKASL CCEDRSDLLP ELIKTLKALR LRTVKAEITT LGGRVKNVLF ITGEEESKDN  300
EQQQQQQQYT ISSIQEALKA VMERTAGDES ASGCIKRQRT NINMLEHRSL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERRRRE
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010262767.10.0PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y11e-102BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0B0N1U51e-175A0A0B0N1U5_G
STRINGPOPTR_0010s14010.11e-170(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.12e-92bHLH family protein